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	<id>http://comp.chem.tohoku.ac.jp/mediawiki/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=Morita</id>
	<title>ComplexRI: Manual - 利用者の投稿記録 [ja]</title>
	<link rel="self" type="application/atom+xml" href="http://comp.chem.tohoku.ac.jp/mediawiki/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=Morita"/>
	<link rel="alternate" type="text/html" href="http://comp.chem.tohoku.ac.jp/mediawiki/index.php/%E7%89%B9%E5%88%A5:%E6%8A%95%E7%A8%BF%E8%A8%98%E9%8C%B2/Morita"/>
	<updated>2026-05-03T04:33:13Z</updated>
	<subtitle>利用者の投稿記録</subtitle>
	<generator>MediaWiki 1.36.2</generator>
	<entry>
		<id>http://comp.chem.tohoku.ac.jp/mediawiki/index.php?title=Tutorial02&amp;diff=1038</id>
		<title>Tutorial02</title>
		<link rel="alternate" type="text/html" href="http://comp.chem.tohoku.ac.jp/mediawiki/index.php?title=Tutorial02&amp;diff=1038"/>
		<updated>2022-05-26T04:50:56Z</updated>

		<summary type="html">&lt;p&gt;Morita: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;div&amp;gt;&amp;lt;span id=&amp;quot;Tutorial02&amp;quot;  style=&amp;quot;font-size: 150%;&amp;quot;&amp;gt; Fitting the complex refractive index by manual mode &amp;lt;/span&amp;gt; &amp;lt;/div&amp;gt;&lt;br /&gt;
----&lt;br /&gt;
: ComplexRI represents the spectra of complex refractive index by&lt;br /&gt;
&lt;br /&gt;
&amp;lt;math&amp;gt; n(\tilde{\nu}) = \eta(\tilde{\nu}) + i \kappa (\tilde{\nu}) = n_j^0 + \sum_{l=1}^{l_{max}} \frac{A_l}{\tilde{\nu}_l - \tilde{\nu} - i \gamma_l} &amp;lt;/math&amp;gt;&lt;br /&gt;
&lt;br /&gt;
and optimize the set of parameters &amp;lt;math&amp;gt;A_l, \tilde{\nu}_l, \gamma_l&amp;lt;/math&amp;gt; and &amp;lt;math&amp;gt;l_{max}&amp;lt;/math&amp;gt;.  &lt;br /&gt;
Sometimes the fitting procedure is facilitated by giving a set of initial guess.&lt;br /&gt;
&lt;br /&gt;
: In this tutorial, we will use the C-C-O asymmetric stretching region of ethanol as an example. The initial parameters in the fitting procedure are set by users. &lt;br /&gt;
: The ATR-IR experimental data file in this tutorial can be downloaded &amp;lt;u&amp;gt;&amp;lt;htmltag tagname=&amp;quot;a&amp;quot; href=&amp;quot;https://comp.chem.tohoku.ac.jp/media/Tutorial/data_ethanol.txt&amp;quot; target=&amp;quot;_blank&amp;quot;&amp;gt;Here&amp;lt;/htmltag&amp;gt;&amp;lt;/u&amp;gt;. Use Ctrl + s to save the file in your local computer. The file name is “data_ethanol.txt”. &lt;br /&gt;
: Then, please move to the Main Package page.&lt;br /&gt;
[[File:Nav-Main.png|1000px]]&lt;br /&gt;
: Upload the“data_ethanol.txt” in ① and set the other parameters according to the following figure. (For the meanings of each part, please refer to ➡[[ComplexRI Manual#Manual#Manual|Manual]].)&lt;br /&gt;
:[[File:6Newtutorial02.png|1600px]]&lt;br /&gt;
: Now, please click the “Execute Fitting” to start fitting. &lt;br /&gt;
&amp;lt;div id=&amp;quot;Results of Tutorial02&amp;quot; style=&amp;quot;font-size: 150%;&amp;quot;&amp;gt; Results of Tutorial02&amp;lt;/div&amp;gt;&lt;br /&gt;
----&lt;br /&gt;
: The Result should be like follows.&lt;br /&gt;
[[File:5Newres_tuto02.png|750px]]&lt;br /&gt;
: The meaning of each output can be found in ➡[[ComplexRI Manual#Manual#Manual|Manual]]&lt;br /&gt;
&lt;br /&gt;
[[Tutorial01|Tutorial01]]&lt;/div&gt;</summary>
		<author><name>Morita</name></author>
	</entry>
	<entry>
		<id>http://comp.chem.tohoku.ac.jp/mediawiki/index.php?title=Tutorial02&amp;diff=1037</id>
		<title>Tutorial02</title>
		<link rel="alternate" type="text/html" href="http://comp.chem.tohoku.ac.jp/mediawiki/index.php?title=Tutorial02&amp;diff=1037"/>
		<updated>2022-05-26T04:47:47Z</updated>

		<summary type="html">&lt;p&gt;Morita: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;div&amp;gt;&amp;lt;span id=&amp;quot;Tutorial02&amp;quot;  style=&amp;quot;font-size: 150%;&amp;quot;&amp;gt; Fitting the complex refractive index by manual mode &amp;lt;/span&amp;gt; &amp;lt;/div&amp;gt;&lt;br /&gt;
----&lt;br /&gt;
: ComplexRI represents the spectra of complex refractive index by&lt;br /&gt;
&lt;br /&gt;
&amp;lt;math&amp;gt; n(\tilde{\nu}) = \eta(\tilde{\nu}) + i \kappa (\tilde{\nu}) = n_j^0 + \sum_{l=1}^{l_{max}} \frac{A_l}{\tilde{\nu}_l - \tilde{\nu} - i \gamma_l} &amp;lt;/math&amp;gt;&lt;br /&gt;
&lt;br /&gt;
and optimize the set of parameters $A_l$, $\nu_l$, $\gamma_l$ and $l_{max}$.  &lt;br /&gt;
Sometimes the fitting of these parameters is facilitated by giving the initial set of parameters.&lt;br /&gt;
&lt;br /&gt;
: In this tutorial, we will use the C-C-O asymmetric stretching region of ethanol as an example. The initial parameters in the fitting procedure are set by users. &lt;br /&gt;
: The ATR-IR experimental data file in this tutorial can be downloaded &amp;lt;u&amp;gt;&amp;lt;htmltag tagname=&amp;quot;a&amp;quot; href=&amp;quot;https://comp.chem.tohoku.ac.jp/media/Tutorial/data_ethanol.txt&amp;quot; target=&amp;quot;_blank&amp;quot;&amp;gt;Here&amp;lt;/htmltag&amp;gt;&amp;lt;/u&amp;gt;. Use Ctrl + s to save the file in your local computer. The file name is “data_ethanol.txt”. &lt;br /&gt;
: Then, please move to the Main Package page.&lt;br /&gt;
[[File:Nav-Main.png|1000px]]&lt;br /&gt;
: Upload the“data_ethanol.txt” in ① and set the other parameters according to the following figure. (For the meanings of each part, please refer to ➡[[ComplexRI Manual#Manual#Manual|Manual]].)&lt;br /&gt;
:[[File:6Newtutorial02.png|1600px]]&lt;br /&gt;
: Now, please click the “Execute Fitting” to start fitting. &lt;br /&gt;
&amp;lt;div id=&amp;quot;Results of Tutorial02&amp;quot; style=&amp;quot;font-size: 150%;&amp;quot;&amp;gt; Results of Tutorial02&amp;lt;/div&amp;gt;&lt;br /&gt;
----&lt;br /&gt;
: The Result should be like follows.&lt;br /&gt;
[[File:5Newres_tuto02.png|750px]]&lt;br /&gt;
: The meaning of each output can be found in ➡[[ComplexRI Manual#Manual#Manual|Manual]]&lt;br /&gt;
&lt;br /&gt;
[[Tutorial01|Tutorial01]]&lt;/div&gt;</summary>
		<author><name>Morita</name></author>
	</entry>
	<entry>
		<id>http://comp.chem.tohoku.ac.jp/mediawiki/index.php?title=Tutorial01&amp;diff=1036</id>
		<title>Tutorial01</title>
		<link rel="alternate" type="text/html" href="http://comp.chem.tohoku.ac.jp/mediawiki/index.php?title=Tutorial01&amp;diff=1036"/>
		<updated>2022-05-26T04:41:00Z</updated>

		<summary type="html">&lt;p&gt;Morita: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;div&amp;gt;&amp;lt;span id=&amp;quot;Tutorial01&amp;quot;  style=&amp;quot;font-size: 150%;&amp;quot;&amp;gt; Fitting the complex refractive index by automatic mode &amp;lt;/span&amp;gt; &amp;lt;/div&amp;gt;&lt;br /&gt;
----&lt;br /&gt;
: In this tutorial, we will use the C=O stretching region of dimethyl carbonate (DMC) as an example. The initial parameters in the fitting procedure are automatically determined by ComplexRI. &lt;br /&gt;
: The ATR-IR experimental data file in this tutorial can be downloaded &amp;lt;u&amp;gt;&amp;lt;htmltag tagname=&amp;quot;a&amp;quot; href=&amp;quot;https://comp.chem.tohoku.ac.jp/media/Tutorial/data_DMC_2col.txt&amp;quot; target=&amp;quot;_blank&amp;quot;&amp;gt;Here&amp;lt;/htmltag&amp;gt;&amp;lt;/u&amp;gt;. Use Ctrl + s to save the file in your local computer. The file name is “data_DMC_2col.txt”.&lt;br /&gt;
: Then, please move to the Main Package page.&lt;br /&gt;
[[File:Nav-Main.png|1000px]]&lt;br /&gt;
: Upload the“data_DMC_2col.txt” in ① and set the other parameters according to the following figure. (For the meanings of each part, please refer to ➡[[ComplexRI Manual#Manual|Manual]].)&lt;br /&gt;
:[[File:2Newtutorial01.png|1500px]]&lt;br /&gt;
: Now, please click the “Execute Fitting” to start fitting. &lt;br /&gt;
&amp;lt;div id=&amp;quot;Results of Tutorial01&amp;quot; style=&amp;quot;font-size: 150%;&amp;quot;&amp;gt; Results of Tutorial01&amp;lt;/div&amp;gt;&lt;br /&gt;
----&lt;br /&gt;
: The Result should be like follows.&lt;br /&gt;
[[File:2Newres_tuto01.png|750px]]&lt;br /&gt;
: The above spectra of complex refractive index are expressed by&lt;br /&gt;
&amp;lt;math&amp;gt; n(\tilde{\nu}) = \eta(\tilde{\nu}) + i \kappa (\tilde{\nu}) = n_j^0 + \sum_l \frac{A_l}{\tilde{\nu}_l - \tilde{\nu} - i \gamma_l} &amp;lt;/math&amp;gt;&lt;br /&gt;
: The meaning of each output can be found in ➡[[ComplexRI Manual#Manual|Manual]]&lt;br /&gt;
&lt;br /&gt;
[[Tutorial02|Tutorial02]]&lt;/div&gt;</summary>
		<author><name>Morita</name></author>
	</entry>
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